Table 3 Phytohormone genes involved in NEC and EC callus
Phytohormone | No. Genes | No. Upregulated (> 1 FC) | No. Downregulated (> 1 FC) | logFC range |
|---|---|---|---|---|
Auxin | 1332 | 129 | 188 | −8 to 7 |
Cytokinin | 355 | 42 | 47 | −9 to 5 |
Gibberellic acid | 461 | 48 | 71 | −10 to 8 |
Abscisic acid | 1508 | 150 | 213 | −8 to 9 |
Jasmonic acid | 781 | 82 | 108 | −8 to 5 |
Salicyic acid | 593 | 74 | 88 | −5 to 5 |
Ethylene | 782 | 82 | 129 | −6 to 5 |
Brassinosteroid | 320 | 47 | 40 | −8 to 8 |