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Table 7 Peanut unique EST homologs identified in soybean, Medicago truncatula, Arabidopsis, rapeseed, rice, maize and wheat in TIGR gene indices

From: Peanut gene expression profiling in developing seeds at different reproduction stages during Aspergillus parasiticusinfection

TIGR Gene Indices

Number of ESTs matched to TIGR Gene Indices (Percent in Parentheses)a

 

Identity ≥ 80%

Identity ≥ 90%

Soybean (Glycine max)

6904 (79.46)

1429 (16.45)

Medicago truncatula

6302 (72.53)

853 (9.82)

Arabidopsis thaliana

3970 (45.69)

470 (5.41)

Rapeseed (Brassica napus)

3345 (38.50)

465 (5.35)

Rice (Oryza sativa)

3128 (36.00)

484 (5.57)

Maize (Zea mays)

2716 (31.26)

402 (4.63)

Wheat (Triticum aestivum)

2940 (33.84)

469 (5.40)

  1. aThe criteria for stand-alone BLASTn were: (1) extract-match bp ≥ 11; (2) E value ≤ 1e-5; and (3) identity ≥ 80% and 90% at DNA sequence level.