Table 1 Endoderm markers and chick orthologues

Gata4

Zinc finger protein

G

XM_420041

Gata5

Faust

Zinc finger protein

G

U11888

Gata6

Zinc finger protein

G

U11889

Foxa1

Hnf3a Tcf3a

Forkhead-domain factor

X

NM_204088

No chick orthologue

Foxa2

Hnf3b Tcf3b?

Forkhead-domain factor

G

NM_204770

Hnf1b

vHNF1 Tcf2

Homeobox

D

H

X

AF244140

X71348

XLXLFB3

ENSGALG00000005504

Hnf4a

Zinc finger domain

G

BG711675

pg11n.pk0008.m3

Hnf6

Onecut1

Homeobox

H

NM_004498

ENSGALG00000004551

Casanova

Cas Sox7?

Sox

D

AAK14780

XSox17a1/2

Sox

G

BM439840

pgr1n.pk001.g24

XSox17b

Sox

X

AAT71997

CMIX

Mix.1

Paired-like homeodomain factor

X

G

P21711

NM204990

Mix.2

tMix

Paired-like homeodomain factor

X

X

Q91685

AAC60020

No chick orthologue

Mixer

Mix.3

Paired-like homeodomain factor

X

AF068263

No chick orthologue

Milk

Bix2

Paired-like homeodomain factor

X

X

AF005999

AF079560

No chick orthologue

Bix1

Mix.4

Paired-like homeodomain factor

X

AF079559

No chick orthologue

Bix3

Paired-like homeodomain factor

X

AF079561

No chick orthologue

Bix4

tBix

Paired-like homeodomain factor

X

AF079562

No chick orthologue

Cerberus

TGFbeta signal antagonist

G

AF139721

Endodermin

Edd

X G

L63543

NW_100702

Similar to alpha-2-macroglobulin ChEST251e24 ChEST729e9 ChEST400g4 no orthologue

Eomesodermin

Eomes

T-box factor

M

O54839

ENSGAGL00000011424

Edd

Ubiquitin ligase

HECT domain

G G G

BU399139

BU412297

BU210891

ChEST492h4 ChEST167b13 ChEST39l14

Hex

Prh Xhex

Homeobox

G

Q05502

Lim1

Lhx1 Xlim1

Cysteine rich motif -LIM domain

X G

X63889

L35569

ENSGALG00000005409

mafA

Basic-leucine zipper (bZIP) transcription factor

G

NM_205025

Pax6

Paired box, and homeodomain

G

NM_205066

Tbx6L

VegT, TbxL

T-box factor

G X

Gi62554175

NM_203527

ENSGALG00000006374

Xlhbox8

Ipf1 Pdx-1 Idx-1 Stf-1 Iuf-1

Homeobox

X G

X16849

XM_425635