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Table 3 Predicted target genes known to be involved in retinal function and disease.

From: Prediction of microRNAs affecting mRNA expression during retinal development

CE-RSCs

P4

Adult

4: NLK

1: NEFL

6: CAMTA1

1: COL18A1

5: NCOR2

1: DDIT4

3: DMD

1: PCDHGC3

6: NCOR2

1: COL2A1

4: CAMTA1

1: DUSP1

2: ADD1

1: PPP1R3F

5: ELOVL4

1: DUSP1

4: ELOVL4

1: FAM57B

2: CAMTA1

1: PSAP

5: NCALD

1: FAM57B

4: NCALD

1: H2AFZ

2: GNB1

1: RARB

4: NLK

1: H2AFZ

4: NLK

1: HSP90AB1

2: GPX3

1: RARG

4: RARG

1: IGFBP5

4: TP53INP2

1: IGFBP5

2: GRIA4

1: RDH10

4: TSPAN9

1: IMPDH1

4: TSPAN9

1: IMPDH1

2: HSPA8

1: RGS16

3: FZD4

1: KIAA0143

3: DMD

1: KIF1B

2: JAG1

1: RHO

3: TEAD1

1: KIF1B

3: FZD4

1: MAK

2: PAX2

1: RIMS1

3: TP53INP2

1: MAK

3: JAG1

1: MAPT

2: RB1

1: SGIP1

3: ZNF385

1: MAPT

3: RARG

1: PCDHGC3

2: SLC17A7

1: SLC12A5

2: CFL1

1: PAX2

3: TEAD1

1: PITPNA

2: TEAD1

1: SLC25A18

2: CSDA

1: PITPNA

2: CSDA

1: PPP1R3F

1: APP

1: SPP1

2: DMD

1: PPP1R3F

2: GPX3

1: PRELP

1: ATP8B1

1: STAC2

2: GPX3

1: PRELP

2: GRIA4

1: PSAP

1: BHLHB3

1: SYP

2: GRIA4

1: PSAP

2: PAX2

1: RARA

1: CAMSAP1

1: TFAP2B

2: JAG1

1: RARB

2: SLC12A5

1: RARB

1: CCNI

1: TP53INP2

2: RARA

1: RB1

2: SLC17A7

1: RB1

1: CFL1

1: TSPAN9

2: RIMS1

1: RDH10

2: TRPM3

1: RDH10

1: CLASP2

1: USH2A

2: SGIP1

1: RGS16

2: ZNF385

1: RGS16

1: COL2A1

1: ZNF385

2: SLC12A5

1: RGS9

1: ACTB

1: RGS9

1: CP

 

2: SLC17A7

1: RHO

1: ACTG1

1: RHO

1: DDIT4

 

2: TAGLN

1: RS1

1: ADD1

1: RIMS1

1: DUSP1

 

2: TRPM3

1: SLC1A3

1: AFF1

1: RS1

1: EEF1A1

 

1: ACTB

1: SLC25A18

1: ANXA2

1: SGIP1

1: EIF1

 

1: ACTG1

1: SMOC2

1: ATP8B1

1: SLC25A18

1: ELOVL4

 

1: AFF1

1: SPARC

1: ATXN7

1: SMOC2

1: FZD4

 

1: ANXA2

1: SPG20

1: CAMK2D

1: SPARC

1: HSP90AB1

 

1: ATP8B1

1: STAC2

1: CCNI

1: SPG20

1: IGFBP5

 

1: ATXN7

1: SYP

1: CFL1

1: STAC2

1: KIF1B

 

1: CAMK2D

1: TFAP2B

1: CLASP2

1: SYP

1: MSH6

 

1: CCNI

 

1: COL11A1

1: TAGLN

1: NCALD

 

1: CLASP2

 

1: COL18A1

1: TFAP2B

1: NCOR2

 

1: COL11A1

 

1: COL2A1

 
  1. Genes predicted to be targeted by one or more candidate miRNA affecting mRNA levels were compared with genes implicated in retinal function[14]. The overlapping genes are listed, with the number of different miRNAs predicted to target them followed by the gene symbol.